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Contents:

  • Introduction to DNA Methylation Analysis
  • General Walkthrough
  • Specialized Functions Walkthrough
  • Using methylprep from the Command Line
  • Using methylprep from within an IDE
  • Troubleshooting, Tips, and FAQs
  • API Reference
  • methylcheck (QC) package
  • methylize (analysis) package
  • Release History
methylprep
  • Docs »
  • Overview: module code

All modules for which code is available

  • methylprep.download.geo
  • methylprep.download.miniml
  • methylprep.download.process_data
  • methylprep.files.idat
  • methylprep.files.manifests
  • methylprep.files.sample_sheets
  • methylprep.models.arrays
  • methylprep.models.controls
  • methylprep.models.probes
  • methylprep.models.samples
  • methylprep.models.sigset
  • methylprep.processing.pipeline
  • methylprep.processing.postprocess
  • methylprep.processing.preprocess

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